Melissa is co-director of the OHSU Library and the director of the Ontology Development Group and an Associate Professor in the Library and the Department of Medical Informatics and Clinical Epidemiology.
Interim Co-Director of the Library Director of the Ontology Development Research Laboratory within the OHSU Library and Department of Medical Informatics and Epidemiology
Principal investigator of:
Development of ontologies and data standards
End-user requirements and user interface design and testing
Science of Science
Promotion of research reproducibility
Development of open science policies and practices
Areas of interest
- When not working, Melissa is usually planting, harvesting, cooking, or eating food.
- B.A., Reed College, Portland Oregon United States 1991
- Ph.D., University of Wisconsin, Madison Wisconsin United States 1999
Vasilevsky NA, Brush MH, Paddock H, Ponting L, Tripathy SJ, LaRocca GM, Haendel MA. (2013) On the reproducibility of science: unique identification of research resources in the biomedical literature.PeerJ 1:e148
Meehan TF, Vasilevsky NA, Mungall CJ, Dougall DS, Haendel MA, Blake JA, Diehl AD. (2013) Ontology based molecular signatures for immune cell types via gene expression analysis. BMC Bioinformatics. 2013 Aug 30;14(1):263.
Haendel MA, Chesler EJ. Lost and found in behavioral informatics. (2012) Int Rev Neurobiol. 2012;103:1-18. doi:10.1016/B978-0-12-388408-4.00001-0.
Nicole Vasilevsky, Tenille Johnson, Karen Corday, Carlo Torniai, Matthew Brush, Erik Segerdell, Melanie Wilson, Chris Shaffer, David Robinson and Melissa Haendel (2012) Research resources: curating the new eagle-i discovery system. Database Vol. 2012, bar067.
Torniai, C., Brush, M., Vasilevsky, N., Segerdell, E., Wison, M., Johnson, T., Corday, K., Shaffer, C., and Haendel, M. (2011) Developing an application ontology for biomedical resource annotation and retrieval: Challenges and lessons learned. International Conference on Biomedical Ontology 2011; July 26–30, 2011; Buffalo, NY.
Mungall CJ, Anderson D, Bandrowski A, Canada B, Chatyr-Aryamontri A, Cheng K, Conn PM, Dolinski K, Ellisman M, Eppig J, Grethe JS, Kemnitz J, Iadonato S, Larson SD, Magness C, Martone ME, Tyers M, Torniai C, Troyanskaya O, Turner J, Westerfield M, Haendel MA. (2011) An ontology-based approach to linking model organisms and resources to human diseases. Poster presentation at: International Conference on Biomedical Ontology 2011; July 26–30, 2011; Buffalo, NY.
Mitchell S, Torniai C, Lowe, B, Corson-Rikert J, Wilson M, Ahmed M, Chen S, Ding Y, Rejack N, Haendel MA. (2011) Aligning research resource and researcher representation: the eagle-i and VIVO use case. Poster presentation at: International Conference on Biomedical Ontology 2011; July 26–30, 2011; Buffalo, NY.
Brush MH, Vasilevsky N, Torniai C, Johnson T, Shaffer C, Haendel MA. (2011) Developing a reagent application ontology within the OBO Foundry Framework. Poster presentation at: International Conference on Biomedical Ontology 2011; July 26–30, 2011; Buffalo, NY.
Mungall, C.J., Gkoutos, G.V., Smith, C.L., Haendel, M.A., Lewis, S.E., and Ashburner, M. (2010) Integrating Phenotype Ontologies across Multiple Species. Genome Biol. 2010 Jan 8;11(1):R2.
Washington, N.L.*, Haendel, M.A.*, Mungall, C.J., Ashburner, M., Westerfield, M., and Lewis, S.L. (2009) Linking human disease to animal models using ontology-based phenotype annotation. PLoS Biol. 2009 Nov;7(11):e1000247. Epub 2009 Nov 24. *These authors contributed equally to this manuscript.