Bret J. Pearson, Ph.D.

  • Professor of Pediatrics, School of Medicine
  • Member, Cell and Developmental Biology Graduate Program, School of Medicine

Biography

I trained for my PhD with Dr. Chris Doe at the University of Oregon where I worked on how neural stem cells in the developing fly embryo can give rise to different progeny on consecutive divisions (multipotency). In my thesis I described a mechanism of “temporal patterning” with cascades of transcription factors that define temporal windows. This training gave me a deep interest in stem cell biology, developmental biology, and neural differentiation.

As a postdoctoral fellow with Dr. Alejandro Sánchez-Alvarado at the University of Utah, I switched from Drosophila to a non-traditional model system: the freshwater planarian. I was interested in following up my neurobiology and stem cell work from flies in a system that can be used to study gene function and stem cells in adult animals in vivo. I was interested in defining how planarians deal with proliferation control as adults, as well as conserved mechanisms of stem cell biology and neural regeneration. In the Sánchez lab, I showed that planarians use canonical tumor suppressor pathways to control proliferation, suggesting they would be a useful model for the study of stemness in cancers – which is indeed the case.

Over the past 12 years, I have run a successful lab at the Hospital for Sick Children/University of Toronto. However, I was recently recruited back to the US in the fall of 2021 to Oregon Health & Science University in the Department of Pediatric Neurooncology, with joint appointments at the Vollum Institute and the Knight Cancer Institute. This opportunity is a perfect fit because I was specifically recruited to continue our work on the biology of stemness and identification of normal stemness pathways that have gone awry in human brain tumors as well as our work on fundamental neuro- and glio-genesis using planarians. On the cancer side, my lab uses comparative genomics and functional screens to find new regulators of stemness that are also conserved in evolution and drive cancer stem cells. On the neurogenesis side, we are trying to identify the neural stem cells and pathways of neurogenesis in planarians during both homeostasis and regeneration. Together, we take unique approaches to long-standing unknowns in neural cancers and neurobiology.

Education and training

  • Degrees

    • B.S., 1994, University of Wisconsin-Madison
    • Ph.D., 2005, University of Oregon

Areas of interest

  • Neural Regeneration
  • Stem Cell Biology
  • Brain Tumor Stem Cells
  • Planarians and Zebrafish
  • Single-cell Genomics

Publications

Selected publications

  • Alex Weiss, Cassandra D’Amata, Bret J. Pearson*, Madeline N. Hayes* (2024) “A syngeneic spontaneous zebrafish model of tp53-deficient, EGFRviii, and PI3KCAH1047R-driven glioblastoma reveals inhibitory roles for inflammation during tumor initiation and relapse in vivo” eLife https://elifesciences.org/articles/93077    PMID: 39052000
  • Nicole Lindsay-Mosher, Sarah Lusk, and Bret J Pearson (2024) “Planarians require ced-12/elmo-1 to clear dead cells by excretion through the gut” Cell Reports 43(1):113621    PMID: 38165802
  • Mallory Wiggans, Shu Jun Zhu, Alyssa M. Molinaro, and Bret J Pearson (2023) “The BAF chromatin remodeling complex licenses planarian stem cells access to ectodermal and mesodermal cell fates” BMC Biology 21(1):227  PMID: 37864247
  • Zaleena Akheralie, Tanner J. Scidmore, and Bret J Pearson (2023) aristaless-like homeobox-3 is wound induced and promotes a low-Wnt environment required for planarian head regeneration” Development 150(18).  PMID: 37681295
  • Andy Chan, Sophia Ma, Bret J Pearson*, and Danny Chan* (2021) “Collagen IV differentially regulates planarian stem cell pluripotency and lineage progression” PNAS 118(16)  PMID: 33859045
  • Michael Pryszlak*, Mallory Wiggans*, Xin Chen, Julia E. Jaramillo, Sarah E. Burns, Laura Richards, Trevor J. Pugh, David R. Kaplan, Xi Huang, Peter B. Dirks, and Bret J. Pearson (2021) “The DEAD-box helicase DDX56 is a highly-conserved stemness regulator in normal and cancer stem cells Cell Reports 34(13):108903,    PubMed PMID: 33789112
  • Alyssa M. Molinaro, Nicole Lindsay-Mosher, and Bret J. Pearson (2021) TOR is required for injury-induced activation of slow-cycling neoblasts in planarians EMBO Reports 22(3):e50292    PMID: 33511776
  • Jason Burgess, Jeffrey T. Burrows, Roshan Sadhak, Sharon Chiang, Alex Weiss, Cassandra D’Amata, Alyssa M. Molinaro, Shujun Zhu, Michael Long, Chun Hu, Ramil Noche, James Dowling, Henry M. Krause, Bret J. Pearson (2020) “An optimized QF-binary expression system for use in Zebrafish” Developmental Biology 465(2):144-56.    PMID: 32697972
  • Maria Brooun, Alexander Klimovich, Mikhail Bashkurov, Bret J. Pearson, Robert E. Steele, and Helen McNeill (2020) “Ancestral roles of atypical cadherinsPNAS 117(32):19310-19320    PMID: 32727892
  • Nicole Lindsay-Mosher, Andy Chan, and Bret J. Pearson (2020) Planarian EGF-repeat containing genes megf6 and hemicentin are required to restrict the stem cell compartment PLoS Genetics 16(2):e1008613    PMID: 32078629
  • Shu Jun Zhu and Bret J. Pearson (2018) “Smed-myb-1 regulates epidermal lineage progression in planarians” Cell Reports 25:38    PMID: 30282036

Publications