Courses
Quantitative and systems biology course list at OHSU
OHSU courses taught by Quantitative and Systems Biology faculty are listed below. Related courses may be available and discoverable through the following programs:
Department of Medical Informatics and Clinical Epidemiology Educational Programs
Biomedical Engineering Graduate Program
Graduate Program in Biomedical Sciences
Biostatistics & Design Program
Computer Science and Electrical Engineering
See also the overview of OHSU degree programs.
Note that the listings below may not be fully current and should be confirmed by directly contacting the pertinent program. Please send any updates/additions to qsb@ohsu.edu.
| Program | Course Number | Course Title | Instructor(s) | Term |
|---|---|---|---|---|
| BEHN | 640-0 | Sys/Behavioral Neuroscience | Lattal, Matt | Fall |
| BEHN | 606-0 | JC: Computational/Theoretical NS | Moghaddam\David | Winter |
| BME | 605 | Readings in Biomedical Eng | Hinds, Monica | Fall |
| BME | 607 | Biomedical Engineering Seminar | Ibsen | F W S |
| BME | 640 | Fluid Mechanics/Biotransport | Rugonyi, Sandra | F or W |
| BME | 645 | Biocompatibility: Host - Implant Interactions | Bertassoni, Luiz | Spring |
| BME | 673 | Cancer Systems Biology | Heiser\Goecks | Spring |
| BME | 674 | Foundations of Measurement Science | Ibsen\Nan | Fall |
| BME | 675 | Analysis of Quantitative Bioscience (Computational Biology) | Ellrott\Xia | Fall |
| BME | 680 | Signals and Linear Systems | Jacobs | Winter |
| BME | 683 | Physiologic modeling and model predictive control | Winter | |
| BME | 690 | Topics in Nanomedicine | Yantasee\Vu | Winter |
| BMI | 510-DL | Intro to Biomed Informatics | Hersh, Bill | Spring |
| BMI | 512-DL | Clinical Information Systems | Mohan, Vishnu | Spring |
| BMI | 543/643 | Introduction to Image Processing | Song, Xubo | |
| BMI | 546-0 | Software Engineering | Cohen, Aaron | Spring |
| BMI | 552B-0 | Research Methods/Bioinformatic | Boudreau, Eilis | Spring |
| BMI | 553-0 | Readings in Bioinformatics | Karstens, Lisa | Spring |
| BMI | 610-DL | Intro to Biomed Informatics | Hersh, Bill | Spring |
| BMI | 646-0 | Software Engineering | Cohen, Aaron | Spring |
| BMI | 652B-0 | Research Methods/Bioinformatic | Boudreau, Eilis | Spring |
| BMI | 653-0 | Readings in Bioinformatics | Karstens, Lisa | Spring |
| BMI | 510-DL | Intro to Biomed Informatics | Hersh, Bill | Fall |
| BMI | 512-DL | Clinical Information Systems | Mohan, Vishnu | Fall |
| BMI | 540-DL | Comp Science/Prog Clin Inform | Hribar, Michelle | Fall |
| BMI | 550-0 | Bio/Comp Biomed I: Algorithms | Zheng, Christina | Fall |
| BMI | 559-0 | Computational Genetics | McWeeney, Shannon | Fall |
| BMI | 565-0 | Bioinfo Programming/Scripting | Mooney, Michael | Fall |
| BMI | 610-DL | Intro to Biomed Informatics | Hersh, Bill | Fall |
| BMI | 612-DL | Clinical Information Systems | Mohan, Vishnu | Fall |
| BMI | 650-0 | Bio/Comp Biomed I: Algorithms | Zheng, Christina | Fall |
| BMI | 659-0 | Computational Genetics | McWeeney, Shannon | Fall |
| BMI | 665-0 | Bioinfo Programming/Scripting | Mooney, Michael | Fall |
| BMI | 510-DL | Intro to Biomed Informatics | Hersh, Bill | Summer |
| BMI | 518-DL | Project Management | McCormack, James | Summer |
| BMI | 548-HY | Human Compu Interaction Biomed | Hribar\Chiang | Summer |
| BMI | 561-HY | Qualitative Research Methods | Ash\Valerius | Summer |
| BMI | 569-HY | Data Analytics | Laderas\McWeeney | Summer |
| BMI | 618-DL | Project Management | McCormack, James | Summer |
| BMI | 648-HY | Human Compu Interaction Biomed | Hribar\Chiang | Summer |
| BMI | 661-HY | Qualitative Research Methods | Ash\Valerius | Summer |
| BMI | 669-HY | Data Analytics | Laderas\McWeeney | Summer |
| BMI | 510-DL | Intro to Biomed Informatics | Hersh, Bill | Winter |
| BMI | 516-DL | Standards/Interoperability HC | Orwoll, Benjamin | Winter |
| BMI | 518-DL | Project Management | McCormack, James | Winter |
| BMI | 535-0 | Mgmt & Processing Large Data | Mooney\Zheng | Winter |
| BMI | 544-DL | Databases | Fletcher, Justin | Winter |
| BMI | 551-0 | BCB II: Statistical Methods | McWeeney, Shannon | Winter |
| BMI | 552A-0 | Research Methods/Bioinformatic | Boudreau, Eilis | Winter |
| BMI | 635-0 | Mgmt & Processing Large Data | Mooney\Zheng | Winter |
| BMI | 651-0 | BCB II: Statistical Methods | McWeeney, Shannon | Winter |
| BMI | 652A-0 | Research Methods/Bioinformatic | Boudreau, Eilis | Winter |
| BMSC | 661 | Structure and Function of Biomolecules | Shinde, Ujwal | Fall |
| BMSC | 666 | Chemical Biology Innovators | Beatty\Schultz | Fall |
| BMSC | 667 | Principles of Physiology | Fall | |
| BMSC | 668 | Molecular Biophysics and Structural Bioinformatics | Shinde, Ujwal | Fall |
| BSTA | 510 | Biostatistics Lab | Choi, Dongseok | Fall |
| BSTA | 511 | Est/Hypo Test Applied Biostat | Nguyen, Thuan | Fall |
| BSTA | 515 | Data Management-Analysis SAS | Nguyen, Thuan | Fall |
| BSTA | 519 | Appl Longitudinal Data Analysi | Fu, Rochelle | Fall |
| BSTA | 550 | Introduction to Probability | Niederhausen, Meike | Fall |
| BSTA | 525 | Intro to Biostatistics | Srikanth, Priya | Fall |
| BSTA | 611 | Est/Hypo Test Applied Biostat | Nguyen, Thuan | Fall |
| BSTA | 510-0 | Biostatistics Lab | Choi, Dongseok | |
| BSTA | 513-0 | Categorical Data Analysis | Chen, Yiyi | Spring |
| BSTA | 516-0 | Design Analysis of Surveys | Nguyen, Thuan | Spring |
| BSTA | 521-0 | Bayesian Methods for Data Analysis | Fu, Rochelle | Spring |
| BSTA | 523-0 | Design of Experiments | Park, Byung | Spring |
| BSTA | 552-0 | Mathematical Statistics II | Minnier, Jessica | Spring |
| BSTA | 613-0 | Categorical Data Analysis | Chen, Yiyi | Spring |
| BSTA | 500 | Reading & Research Biostat | Fu, Rochelle | Summer |
| BSTA | 510 | Biostatistics Lab | Choi, Dongseok | Summer |
| BSTA | 517 | Stat Methods Clinical Trials | Chen, Yiyi | Summer |
| BSTA | 525 | Introduction to Biostatistics | Lin, Amber | Summer |
| BSTA | 500 | Reading & Research Biostat | Fu, Rochelle | Winter |
| BSTA | 510 | Biostatistics Lab | Choi, Dongseok | Winter |
| BSTA | 512 | Linear Models | Nguyen, Thuan | Winter |
| BSTA | 514 | Survival Analysis | Lapidus, Jodi | Winter |
| BSTA | 522 | Statistical Learning/Big Data | Choi, Dongseok | Winter |
| BSTA | 551 | Mathematical Statistics I | Yanez, David | Winter |
| BSTA | 612 | Linear Models | Nguyen, Thuan | Winter |
| CANB | 606-0 | Mechanisms/Cancer Jrl Club | Qian\Agarwal | Winter |
| CANB | 606A-0 | Tumor Microenvironment JC | Lund, Amanda | Winter |
| CANB | 607-0 | Cancer Biology Seminar Series | Oshimori\Sherman | Winter |
| CANB | 616 | Advanced Topics in Cancer Biology | Korkola, James | |
| CS | 559-0 | Machine Learning | Song, Xubo | Spring |
| CS | 631-0 | Princ/Prac Data Visualization | Bedrick\Wirz | Spring |
| CS | 659-0 | Machine Learning | Song, Xubo | Spring |
| CS | 555-0 | Analyzing Sequences | Asgari, Meysam | Fall |
| CS | 560-0 | Artificial Intelligence | Heeman, Peter | Fall |
| CS | 623-0 | Deep Learning | Asgari, Meysam | Fall |
| CS | 655-0 | Analyzing Sequences | Asgari, Meysam | Fall |
| CS | 660-0 | Artificial Intelligence | Heeman, Peter | Fall |
| CS | 532-0 | Analy & Design of Algorithms | Heeman, Peter | Summer |
| CS | 632-0 | Analy & Design of Algorithms | Heeman, Peter | Summer |
| CS | 562-0 | Natural Language Processing | Bedrick, Steven | Winter |
| CS | 606-XS | Advanced Machine Learning | Song, Xubo | Winter |
| CS | 662-0 | Natural Language Processing | Bedrick, Steven | Winter |
| CS | 692-0 | Research Ethics for CS & EE | Dolata, Jill | Winter |
| DM | 711 | Introduction to Dental Materials | Pfeifer, Carmem | |
| DM | 712 | Introduction to Dental Materials | Pfeifer, Carmem | |
| DM | 731 | Clinical applications of dental materials | Pfeifer, Carmem | |
| EE | 559-0 | Machine Learning | Song, Xubo | Spring |
| EE | 659-0 | Machine Learning | Song, Xubo | Spring |
| EE | 555-0 | Analyzing Sequences | Asgari, Meysam | Fall |
| EE | 623-0 | Deep Learning | Asgari, Meysam | Fall |
| EE | 655-0 | Analyzing Sequences | Asgari, Meysam | Fall |
| EE | 606-XS | Advanced Machine Learning | Song, Xubo | Winter |
| EE | 682-0 | Digital Signal Processing | Jacobs | Winter |
| EE | 692-0 | Research Ethics for CS & EE | Dolata, Jill | Winter |
| MATH | 530-0 | Probability and Stat Inference | Hill, Alison | Fall |
| MATH | 630-0 | Probability and Stat Inference | Hill, Alison | Fall |
| MBIM | 610-0 | Introduction to Immunology | Lind, Evan | Winter |
| MGEN | 610-0 | Essentials Molecular & Med Gen | Ralle, Martina | Winter |
| MGEN | 625 | Epigenetics & Reprogramming | Carbone\Adey | |
| MGRD | 627-0 | Research Methods-Data/Info Literacy | Wyatt, Letisha | Spring |
| MGT | 572-HY | Financial Mgmt in Healthcare | Granholm, Gudrun | Spring |
| MGT | 519-HY | Project Mgmt in Healthcare | Sakaguchi, Ronald | Fall |
| MGT | 561-HY | Financial Accounting for H/C | Granholm, Gudrun | Fall |
| MP | 507-0 | Seminar: Diagnostic Imaging | Griglock\DeWeese | Spring |
| MP | 537-0 | Shielding/Medical Physicists | Tack\Griglock | Spring |
| MP | 542-0 | Diagnostic Imaging Physics II | Griglock\DeWeese | Spring |
| MP | 541-0 | Diagnostic Imaging Physics I | DeWeese\Griglock | Winter |
| MP | 544-0 | Nuclear Medicine Imaging | Griglock, Thomas | Winter |
| MP | 561-0 | Radiation Therapy Physics I | Pugachev, Andrei | Winter |
| MP | 564-0 | Appl'd Rad Therapy Phys Lab II | Pugachev, Andrei | Winter |
| MP | 570-0 | Rad Biology/Medical Physicists | DeWeese, Lindsay | Winter |
| NEUS | 627-0 | Systems Neuroscience | von Gersdorff\David | Fall |
| NEUS | 606-0 | Biophysics Journal Club | Trussell, Laurence | Winter |
| NUTN | 533-0 | Nutritional Genomics | Hansen, Joyanna | Spring |
| NUTN | 535-0 | Oncology Nutrition | McGuire, Julie | Fall |
| NUTN | 635-0 | Oncology Nutrition | Stadler, Diane | Fall |
| PHPH | 617-0 | Pharmacokinetics | Duvoisin, Robert | Fall |
| PHPH | 617-0 | Pharmacokinetics | Scanlan, Tom | Winter |
| PHPH | 621 | Vision Science: Theoretical, Translational, and Clinical Aspects | Huang, David | |
| PHPM | 524-0 | Intro to Biostatistics | Srikanth, Priya | Spring |
| UNI | 504 | Qualitative Methods/Health Pro | Marriott, Lisa | Fall |
| UNI | 504 | Qualitative Methods/Health Pro | Marriott, Lisa | Winter |