Congenital CMV Qualitative PCR

Orderable EAP code:

[LAB104122] CONGENITAL CMV, QUALITATIVE PCR, SALIVA [LAB104123] CONGENITAL CMV, QUALITATIVE PCR, URINE

Billable EAP Codes:

80005816

CPT Codes:

87496

Lab Section:

Molecular Lab

Turnaround Time:

2 Days 

Test Schedule:

Monday - Friday

Specimen Requirements:

Saliva Swab collected in UTM or VTM /Urine.

Pediatric Specimen Requirements:

Saliva Swab collected in UTM or VTM /Urine.

Reference Range:

CMV: Not Detected
CMV: Detected, Invalid

Comments:

Testing is for infants less than 21 days of age.

Positive results from a saliva swab are presumptive and should be confirmed with urine.

Synonyms:

Congenital Cytomegalovirus
cCMV
Congenital CMV

Broad Range PCR

Orderable EAP code:

LAB102260

Billable EAP Codes:

80005785 HB-Lab Fungal ID, Amplified Probe Technique 80005786 HB-Lab Bacterial ID, Amplified Probe Technique 80005784 HB-Lab Mycobacterial ID, Amplified Probe Technique

CPT Codes:

87801 87801 87551

Lab Section:

Molecular Lab

Turnaround Time:

2 Weeks 

Test Schedule:

Pick up every Saturday, run in batches. 

Interpretation:

Species or Genus level naming 

Specimen Requirements:

1 ml of fluid

Reference Range:

Not Detected 

Comments:

Broad Range PCR can only name one species, if multiple organisms are present then other methods such as culturing or NGS should be considered. Culturing should always be performed first. 

Synonyms:

16s

ITS

D2

Sanger Sequencing 

HSV-1 and HSV-2 Subtype by PCR

Orderable EAP code:

LAB103103

Billable EAP Codes:

80003292

CPT Codes:

87529 x 2

Lab Section:

Molecular Lab

Turnaround Time:

5 Days 

Test Schedule:

Monday - Friday

Related Links:

ARUP Test Directory

Specimen Requirements:

Swab collected in UTM or VTM.

CSF minimum 100uL in sterile container. 

Pediatric Specimen Requirements:

Swab collected in UTM or VTM.

CSF minimum 100uL in sterile container. 

Reference Range:

HSV 1 Not Detected, HSV 2 Not Detected. 

HSV 1 Detected, HSV 2 Detected. 

Invalid.

Comments:

All other sample types will be sent to ARUP Lab. 

 

Synonyms:

Herpes

Herpes 1

Herpes Type 1 

HSV

HSV1

HSV2 

Herpes Type 2

Herpes Simplex 

Hepatitis B by PCR

Orderable EAP code:

LAB101348

Billable EAP Codes:

80003552 x 1

CPT Codes:

87517 x 1

Lab Section:

Molecular Lab

Turnaround Time:

4 days

Test Schedule:

Tuesday and Thursday 

Specimen Requirements:

6 mL blood in a LAVENDER top (EDTA) tube. 2.5 mL plasma minimum. Spin within 24 hours and freeze immediately.

Alternatively, serum from a red top tube may be prepared, frozen, and submitted for the assay.

Plasma or serum is stable for 5 days refrigerated or 60 days frozen.

Pediatric Specimen Requirements:

2.5 mL blood in a LAVENDER top (EDTA) tube. 1.0 mL plasma minimum. Spin within 24 hours and freeze immediately.

Alternatively, serum from a red top tube may be prepared, frozen, and submitted for the assay.

Plasma or serum is stable for 5 days refrigerated or 60 days frozen.

Synonyms:

HBV

Hep B

Hep B Quant

Hepatitis B Quant

Epstein-Barr Virus (EBV) by PCR, Quantitative

Orderable EAP code:

LAB100356 (Plasma)

Billable EAP Codes:

89000123 x 1

CPT Codes:

87799 x 1

Lab Section:

Molecular Lab

Turnaround Time:

3 Days

Test Schedule:

Monday, Wednesday, and Friday 

Specimen Requirements:

5 mL blood in a LAVENDER top (EDTA) tube or Plasma Prep Tube (PPT), minimum of 2mL.

Send to lab within 6 hours or spin and freeze plasma immediately.  Transport frozen. Plasma is stable for 6 days refrigerated and 12 weeks frozen.

Pediatric Specimen Requirements:

2.5 mL blood in a LAVENDER top (EDTA) tube or Plasma Prep Tube (PPT), minimum of 2mL.

Send to lab within 6 hours or spin and freeze plasma immediately.  Transport frozen. Plasma is stable for 6 days refrigerated and 12 weeks frozen.

Synonyms:

EBV Viral Load

Epstein-Barr Virus Quant, Plasma

HPV by PCR with Genotyping

Orderable EAP code:

LAB101538 HPV by PCR with Genotyping (Cervix/Vagina). LAB104066 HPV by PCR with Genotyping (Rectum)

Billable EAP Codes:

80003033 x 1

CPT Codes:

87624 x 1

Lab Section:

Molecular Lab

Turnaround Time:

3 Days

Test Schedule:

Monday through Friday 

Related Links:

HPV Self Collection Instructions

Specimen Requirements:

Cervical specimens collected in ThinPrep Preservative Fluid can be transported at 15 to 30 degrees C.
Stable at room temperature for 6 weeks.

Self-collection samples are collected by patient using Copan FLOQSwab then clinic is to suspend sample in ThinPrep PreservCyt and discard swab.
Refer to link above for patient instructions in multiple languages and more detailed instructions.

Pediatric Specimen Requirements:

Cervical specimens collected in ThinPrep Preservative Fluid can be transported at 15 to 30 degrees C.
Stable at room temperature for 6 weeks

Self-collection samples are collected by patient using Copan FLOQSwab then clinic is to suspend sample in ThinPrep PreservCyt and discard swab.
Refer to link above for patient instructions in multiple languages and more detailed instructions.

Comments:

Test validated for Cervix, Vagina, and Rectum sources. 

This PCR test simultaneously detects all 14 high risk carcinogenic HPV subtypes. The HPV genotypes included are 16, 18, and a pool of twelve others (31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66 and 68). SurePath has not been approved by the FDA for HPV testing using the Cobas system, but has been validated by the OHSU Lab for in vitro diagnostic testing. OHSU Lab is a CLIA and CAP accredited laboratory for high complexity clinical testing.

Synonyms:

High-Risk HPV
HPV
Human Papillomavirus High-Risk DNA Test

COVID-19, PCR

Orderable EAP code:

LAB103362

Billable EAP Codes:

80005522 x 1

CPT Codes:

87635 x 1

Lab Section:

Molecular Lab

Turnaround Time:

3 Days 

Test Schedule:

Monday, Wednesday, and Friday

Critical Values:

Detected and inconclusive results are critical values.

Specimen Requirements:

Sample type: nasopharyngeal (NP) swab, oropharyngeal (OP) swab, nasal aspirates, nasal washes, endotracheal aspirates, and saliva.

Sample volume: 1 to 3 mL VTM, UTM or PBS. The minimal sample is 500 microliters.

Stable for up to 48 hours at room temperature or refrigerated.

Comments:

Specificity is 98% and sensitivity is 96% (330 viral copies/ml).

Synonyms:

SARS-CoV-2

Varicella Zoster Virus By PCR

Orderable EAP code:

LAB00356

Billable EAP Codes:

80001587 x 1

CPT Codes:

87798 x 1

Lab Section:

Molecular Lab

Turnaround Time:

5 Days 

Test Schedule:

Monday - Friday

Related Links:

ARUP Test Directory

Specimen Requirements:

Swab collected in UTM or VTM.

CSF in sterile container, minimum volume 100uL

Pediatric Specimen Requirements:

Swab collected in UTM or VTM.

CSF in sterile container, minimum volume 100uL

Reference Range:

VZV Not Detected

VZV Detected

Invalid

Comments:

All other sample types will be sent to ARUP Lab. 

Synonyms:

Varicella-Zoster Virus

Chickenpox

Varicella

Herpes Zoster

Shingles

HHV-3

Human Herpesvirus

 

HIV-1 Viral Load, Quantitative

Orderable EAP code:

LAB00779

Billable EAP Codes:

80002389 x 1

CPT Codes:

87536 x 1

Lab Section:

Molecular Lab

Turnaround Time:

4 Days

Test Schedule:

Tuesday and Thursday 

Specimen Requirements:

Collect 5 to 10 mL blood in a LAVENDER top (EDTA) tube. Spin within 24 hours and immediately freeze plasma (minimum of 1.5 mL plasma to allow a repeat). Specimens collected in green top tubes (heparin) are unsuitable for testing.

Plasma or serum is stable for 5 days refrigerated or 60 days frozen.

Pediatric Specimen Requirements:

Collect 5 to 10 mL blood in a LAVENDER top (EDTA) tube. Spin within 24 hours and immediately freeze plasma (minimum of 1.5 mL plasma to allow a repeat). Specimens collected in green top tubes (heparin) are unsuitable for testing.

Plasma or serum is stable for 5 days refrigerated or 60 days frozen.

Synonyms:

HIV-1 RNA

HIV-1 Viral Load Ultra Quantitative

Hepatitis C Quantitative

Orderable EAP code:

LAB00776

Billable EAP Codes:

80002388 x 1

CPT Codes:

87522 x 1

Lab Section:

Molecular Lab

Turnaround Time:

4 days.

Test Schedule:

Monday, Wednesday and Friday 

Specimen Requirements:

6 mL blood in a LAVENDER top (EDTA) tube. Spin within 24 hours and freeze 2.5 mL plasma immediately. 

Alternatively, serum from a red top tube may be separated, frozen, and submitted for testing.

Plasma or serum is stable for 5 days refrigerated or 60 days frozen.

Pediatric Specimen Requirements:

2.5 mL blood in a LAVENDER top (EDTA) tube. 1.0 mL plasma minimum. Spin within 24 hours and freeze immediately.

Alternatively, serum from a red top tube may be prepared, frozen, and submitted for the assay.

Plasma or serum is stable for 5 days refrigerated or 60 days frozen.

Synonyms:

HCV

HCV Viral Load

Hep C

Hep C Viral Load, Hep C

Hepatitis C Viral Load

HQT

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