OHSU

Chris Harrington, Ph.D. Publications

Harrington, C.A.,Rosenow, C., and Retief, J. (2000): Monitoring Gene Expression Using DNA Microarrays. Current Opinion in Microbiology 3: 285-291.

Dieckgraefe, B., Stenson, W., Korzenik, P., Swanson P., and Harrington, C.A.(2000): Analysis of mucosal gene expression in inflammatory bowel disease by parallel oligonucleotide arrays. Physiological Genomics 4:1-11.

Zheng, Z., Venkatapathy, S., Rao, G. and Harrington, C.A. (2002): Expression profiling of B cell chronic lymphocytic leukemia suggests deficient CD1-mediated immunity, polarized cytokine response, altered adhesion and increased intracellular protein transport and processing of leukemic cells. Leukemia 16:2429-37.

Liu, W-M., Mei, R., Di. X., Ryder, T.B., Hubbel, E., Dee, S., Webster, T.A., Harrington, C.A., Ho, M-H., Baid, J. and Smeekens, S.P. (2002): Analysis of High Density Expression Microarrays with Signed-rank Call Algorithms.  Bioinformatics 18:1593-1599

Stenzel-Poore, M.P., Stevens, S.L., Xiong, Z., Lessov, N.S., Harrington, C.A., Mori, M., Meller, R., Rosenzweig, H.L., Tobar, E., Shaw, T.E., Chu, X., Simon, R.P. (2003): Ischemic preconditioning reprograms the genomic response to cerebral ischemia and mimics neuroprotective strategies reported to occur in hibernation.  Lancet 362:1028-1037.

Hitzemann, R, Reed, C, Malmanger, B, Lawler, M., Hitzemann, B, Cunningham, B, McWeeney, S, Belknap, JK, Harrington, C, Buck, KJ, Phillips, T and Crabbe, J, (2004) On the integration of alcohol-related QTLs and gene expression. Alc: Clin Exp Res. 28:1437-1448.

Crossman LC, Mori M, Hsieh YC, Lange T, Paschka P, Harrington CA, Krohn K,Niederwieser DW, Hehlmann R, Hochhaus A, Druker BJ, Deininger MW.  In chronic myeloid leukemia white cells from cytogenetic responders and  non-responders to imatinib have very similar gene expression signatures. Haematologica. 2005 Apr;90(4):459-64.

Wilmot, B, McWeeney, SK, Nixon, RR, Montine, TJ, Laut, L, Harrington, CA, Kaye, JA, Kramer, PL.  Translational gene mapping of cognitive decline, Neurobiology of Aging, 2008 Apr; 29(4):524-41. Epub 2006 Dec 14.

Yang, H, Harrington, CA, Vartanian, K, Coldren, CD, Hall, R, Churchill, GA. Randomization in laboratory procedure is key to obtaining reproducible microarray results. PLoS ONE, 2008, 3(11): e3724 doi:10.1371/journal.pone.0003724

Vartanian K, Slottke R, Johnstone T, Casale A, Planck SR, Choi D, Smith JR, Rosenbaum JT, Harrington CA.  Gene expression profiling of whole blood: Comparison of target preparation methods for accurate and reproducible microarray analysis. BMC Genomics. 2009 Jan 5;10(1):2. 

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