About

The GPSR is located on OHSU Marquam Hill Campus in Richard Jones Hall room 5390

CORE INFORMATION

Please keep in mind when planning your early summer experiments that the GPSR will be performing its annual laboratory inventorying, maintenance, and organization June 8th through the 12th, 2015. We will not be processing any samples.  However, we will still accept project applications and receive samples.


Services We Offer

  • Expression Profiling: mRNA and microRNA expression profiling, including options for whole transcript analysis and alternative transcript/exon analysis (microarray and qPCR)
  • DNA Variation Analysis: Whole genome and targeted SNP genotyping and copy number analysis with microarrays and PCR assays
  • RNA and DNA Isolation: Support available for RNA/DNA isolation in connection with microarray, sequencing or qPCR projects; automated protocols for QIAGEN spin-column kits, including PAXGene Blood RNA kits
  • RNA Assessment: Quantification and  size or quality assessment of RNA samples
  • DNA Assessment: Quantification and size or quality assessment of DNA samples
  • Consulting for project design and grant development

Instrument Access We Offer

  • QuantStudio qPCR System
  • Caliper LabChip GX System
  • Qiagen QIAcube Sample Prep Robots

For all other service and instrument access inquiries, please contact the GPSR Director.

Unsure which platform and array to use? Questions about minimum RNA quantities required? Use our pull down menu for expression profiling by species to see what arrays and assays are commonly used in the GPSR! Don't see array or species you want? Contact the GPSR potteram@ohsu.edu.

Apply for a Project

Click on a link below to access a downloadable project application.

Expression Profiling

DNA Variation Analysis 

RNA and DNA Isolation

RNA Assessment (as a stand-alone service, without immediate plans for array hybridization)

DNA Assessment (as a stand-alone service, without immediate plans for array hybridization)

If you would like to request pre-project consultation or a service that is not represented by one of the forms listed above, please contact Dr. Chris Harrington, GPSR Director.

INSTRUMENT USE
Click on link below to request instrument training and access through iLab.
If you require more information or assistance using the iLab ordering system, contact Trevor McFarland at mcfarlat@ohsu.edu or Chris Harrington at harringc@ohsu.edu

GPSR Acknowledgement

We would appreciate the inclusion of the following acknowledgment in publications and presentations of work done in the GPSR facility:

(Insert appropriate service or platform) were performed in the OHSU Gene Profiling Shared Resource

Services/Platforms: Microarray or qPCR assays, DNA or RNA isolation services, DNA or RNA quality assessments