OHSU

Shannon McWeeney, Ph.D.

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Background

Statistical Genetics, Computational Biology, Network Reconstruction, Statistical Methodology for functional genomics data, data cleaning and data integration


Summary of Current Research

Dr. Shannon McWeeney is the Head of the Divison of Bioinformatics and Computatational Biology in the Department of Medical Informatics and Clinical Epidemiology, and a Faculty member in the Division of Biostatistics, Department of Public Health and Preventive Medicine. She is the Director of the OHSU Knight Cancer Institute Bioinformatics Shared Resource and the OCTRI Translational Bioinformatics Program. In 2010, Dr. McWeeney was selected as a Kavli Frontiers of Science Fellow.


Selected Publications

"A simulation framework to investigate in vitro viral infection dynamics," Journal of Computational Science (Vol: 4, Issue: 3, Page 127-134) - 2013

"A systems framework for vaccine design," Current Opinion in Immunology - 2013

"Androgen Receptor Promotes Ligand-Independent Prostate Cancer Progression through c-Myc Upregulation," PLoS ONE (Vol: 8, Issue: 5, ) - 2013

"Comparison of methods to identify aberrant expression patterns in individual patients: Augmenting our toolkit for precision medicine," Genome Medicine (Vol: 5, Issue: 11, ) - 2013

"Copy number variation analysis in 98 individuals with PHACE syndrome," Journal of Investigative Dermatology (Vol: 133, Issue: 3, Page 677-684) - 2013

 

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Contact

  Email Shannon McWeeney

503 494-8347