Biodefense & Emerging Disease Publications
2008
Ansong, C., H. Yoon, A. D. Norbeck, J. K. Gustin, J. E. McDermott, H. M. Mottaz, J. Rue, J. N. Adkins, F. Heffron, and R. D. Smith. 2008. Proteomics analysis of the causative agent of typhoid fever. J. Proteome Res. 7:546-557. PMID: 18166006
Baas T., A. Roberts, T. H. Tea, L. Vogel, J. Chen, T. M. Tumpey, M. G. Katze, and K. Subbarao. 2008. Genomic analysis reveals age dependent innate immune responses to SARS coronavirus. J. Virol. 82:9465-9476. PMID: 18632870 PMCID: PMC2546950
Baric, R. S. 2008. SARS-CoV: Lessons for global health. Virus Res. 133:1-3. PMID: 17467837 PMCID: PMC2633111
Callister, S. J., L. A. McCue, J. E. Turse, M. E. Monroe, K. J. Auberry, R. D. Smith, J. Adkins, and M. S. Lipton. 2008. Comparative bacterial proteomics: Analysis of the core genome concept. PLoS ONE 3:e1542. PMID: 18253490 PMCID: PMC2213561
Chachu, K. A, D. W. Strong, A. D. LoBue, C. E. Wobus, R. S. Baric, and H. W. Virgin. 2008. Antibody is critical for the clearance of MNV infection. J. Virol. 82:6610-6617. PMID: 18417579 PMCID: PMC2447077
Daffis, S., M. A. Samuel, M. S. Suthar, B. C. Keller, M. Gale, Jr., and M. S. Diamond. 2008. Interferon regulatory factor (IRF)-7 induces the antiviral interferon (IFN)-{alpha} response and protects against lethal West Nile virus infection. J. Virol. 82:8465-8475. PMID: 18562536 PMCID: PMC2519659
Donaldson, E., L. Lindesmith, A. LoBue, and R. S. Baric. 2008. Norovirus pathogenesis: Mechanisms of persistence and immune evasion in human populations. Immunol. Rev. 225:190-211. PMID: 18837783
Dubois, M. and M. K. Slifka. 2008. Retrospective analysis of monkeypox infection. Emerg. Inf. Dis. 14:592-599. PMID: 18394277 PMCID: PMC2570942
Fredericksen, B., B. Keller, J. Fornek, M. G. Katze, and M. Gale, Jr. 2008. Establishment and maintenance of the innate antiviral response to West Nile virus involves both RIG-I and MDA5 signaling through IPS-1. J. Virol. 82:609-616. PMID: 17977974 PMCID: PMC2224571
Frieman, M., and R. S. Baric. 2008. Mechanisms of SARS pathogenesis and innate immune modulation. Microbiol. Mol. Biol. Rev. 72:672-685. PMID: 19052324 PMCID: PMC2593566
Frieman, M., M. Heise, and R. Baric. 2008. SARS coronavirus and innate immunity. Virus Res. 133:101-112. PMID: 17451827 PMCID: PMC2292640
Gambotto, A., S. M. Barratt-Boyes, M. D. de Jong, G. Neumann, and Y. Kawaoka. 2008. Human infection with highly pathogenic H5N1 influenza virus. Lancet 371:1464-1475. PMID: 18440429
Halfmann P., J. H. Kim, H. Ebihara, T. Noda, G. Neumann, H, Feldmann, and Y. Kawaoka. 2008. Generation of biologically contained Ebola viruses. Proc. Natl. Acad. Sci. USA. 105:1129-1133. PMID: 18212124 PMCID: PMC2234103
Hammarlund, E., A. Dasgupta, K. Frueh, and M. K. Slifka. 2008. Monkeypox virus evades antiviral CD4+ and CD8+ T cell responses by suppressing cognate T cell activation. Proc. Natl. Acad. Sci. USA. 105:14567-14572. PMID: 18796610 PMCID: PMC2567221
Hammarlund, E., M. W. Lewis, J. Hanifin, E. Simpson, N. Carlson, and M. K. Slifka. 2008. Traditional smallpox vaccination with reduced risk of inadvertent contact spread by administration of povidone iodine ointment. Vaccine.26:430-439. PMID: 18083278 PMCID: PMC2323604
Hao, L., A. Sakurai, T. Watanabe, E. Sorensen, C. A. Nidom, M. A. Newton, P. Ahlquist, and Y. Kawaoka. 2008. Drosophila RNAi screen identifies host genes important for influenza virus replication. Nature. 454:890-893. PMID: 18615016 PMCID: PMC2574945
Ishikawa, T., D. G. Widman, N. Bourne, E. Konishi, and P. W. Mason. 2008. Construction and evaluation of a chimeric pseudoinfectious virus vaccine to prevent Japanese encephalitis. Vaccine. 26:2772-2781. PMID: 18433947
Itoh, Y., H. Ozaki, H. Tsuchiya, K. Okamoto, R. Torii, Y. Sakoda, Y. Kawaoka, K. Ogasawara, and H. Kida. 2008. A vaccine prepared from a non-pathogenic H5N1 avian influenza virus strain confers protective immunity against highly pathogenic avian influenza virus infection in cynomolgus macaques. Vaccine. 26:562-572. PMID: 18164788
Iwatsuki-Horimoto, K., Y. Hatta, M. Hatta, Y. Muramoto, H. Chen, Y. Kawaoka, and T. Horimoto. 2008. Limited compatibility between the RNA polymerase components of influenza virus type A and B. Virus Res. 135:161-165. PMID: 18455827 PMCID: PMC2474793
Jones, J., I. Messaoudi, R. Estep, B. Orzechowska, and S. Wong. 2008. Monkeypox viral chemokine inhibitor MPV vCCI, a potent inhibitor of rhesus macrophage inflammatory protein-1. Cytokine. 43:220-228. PMID: 18639466 PMCID: PMC2547134
Jiao, P., G. Tian, Y. Li, G. Deng, Y. Jiang, C. Liu, W. Liu, Z. Bu, Y. Kawaoka, and H. Chen. 2008. A single-amino-acid substitution in the NS1 protein changes the pathogenicity of H5N1 avian influenza viruses in mice. J. Virol. 82:1146-1154. PMID: 18032512 PMCID: PMC2224464
Katze, M. G., J. L. Fornek, R. E. Palermo, K.-A. Walters, and M. J. Korth. 2008. Innate immune modulation by RNA viruses: Emerging insights from functional genomics. Nat. Rev. Immunol. 8:644-654. PMID: 18654572
Krishnan, M.N., A. Ng, B. Sukumaran, F. D. Gilfoy, P. D. Uchil, H. Sultana, A. L. Brass, R. Adametz, M. Tsui, F. Qian, R. R. Montgomery, S. Lev, P. W. Mason, R. A. Koski, S. J. Elledge, R. J. Xavier, H. Agaisse, and E. Fikrig. 2008. RNA interference screen for human genes associated with West Nile virus infection. Nature. 455:242-245. PMID: 18690214
Lamirande, E.W., M. L. Dediego, A. Roberts, J. P. Jackson, E. Alvarez, T. Sheahan, W. J. Shieh, S. R. Zaki, R. Baric, L. Enjuanes, and K. Subbarao. 2008. A live attenuated SARS coronavirus is immunogenic and efficacious in golden Syrian hamsters. J. Virol. 82:7721-7724. PMID: 18463152 PMCID: PMC2493341
Lindesmith, L., E. Donaldson, A. Lobue, J. Cannon, J. Vinje, and R. S. Baric. 2008. Mechanisms of zoonotic Severe Acute Respiratory Syndrome Coronavirus host range expansion in human airway epithelium. J. Virol. 82:2274–2285. PMID: 18094188 PMCID: PMC2258931
Loo, Y. M., J. Fornek, N. Crochet, G. Bajwa, O. Perwistasari, L. Martinez-Sobrido, S. Akira, M. Gill, A. Garcia-Sastre, M. G. Katze, and M. Gale, Jr. 2008. Distinct RIG-I and MDA5 signaling by RNA viruses in innate immunity. J. Virol. 82:335-345. PMID: 17942531 PMCID: PMC2224404
Manes, N. P., R. D. Estep, H. M. Mottaz, R. J. Moore, T. R. Clauss, M. E. Monroe, X. Du, J. N. Adkins, S. W. Wong, and R. D. Smith. 2008. Comparative proteomics of human monkeypox and vaccinia intracellular mature and extracellular enveloped virions. J. Proteome Res. 7:960-968. PMID: 18205298 PMCID: PMC2517256
McRoy, W., and R. S. Baric. 2008. Amino acid substitutions in the S2 subunit of mouse hepatitis virus variant V51 encode determinants of host range expansion. J. Virol. 82:2274-2285. PMID: 18032498 PMCID: PMC2224421
Medigeshi, G.R., A. J. Hirsch, D. N. Streblow, J. Nikolich-Zugich, and J. A. Nelson. 2008. West Nile virus entry requires cholesterol-rich membrane microdomains and is independent of alphabeta 3 integrins. J. Virol. 82:5212-5219. PMID: 18385233 PMCID: PMC2395215
Marsolais, D., B. Hahm, K. H. Edelmann, K. B. Walsh, M. Guerrero, Y. Hatta, Y. Kawaoka, E. Roberts, M. B. Oldstone, and H. Rosen. 2008. Local not systemic modulation of dendritic cell S1P receptors in lung blunts virus-specific immune responses to influenza. Mol. Pharmacol. 74:896-903. PMID: 18577684 PMCID: PMC2574812
Murakami, S., T. Horimoto, S. Yamada, S. Kakugawa, H. Goto, and Y. Kawaoka. 2008. Establishment of canine RNA polymerase I-driven reverse genetics for influenza A virus: Its application for H5N1 vaccine production. J. Virol. 82:1605-1609. PMID: 18045936 PMCID: PMC2224466
Pacciarini, F., S. Ghezzi, F. Canducci, A. Sims, M. Sampaolo, E. Ferioli, M. Clementi, G. Poli, P.-G. Conaldi, R. S. Baric, and E. Vicenzi. 2008. Persistent replication of Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) in human tubular kidney cells selects for adaptive mutations in the membrane protein. J. Virol. 82:5137-5144. PMID: 18367528 PMCID: PMC2395189
Pitaluga, A. N., P.W. Mason, and Y. M. Traub-Cseko. 2008. Non-specific antiviral response detected in RNA-treated cultured cells of the sandfly, Lutzomyia longipalpis. Dev. Comp. Immunol. 32:191-197. PMID: 17706772
Rodland, K. D., J. N. Adkins, C. Ansong, S. Chowdhury, N. P. Manes, L. Shi, H. Yoon, R. D. Smith, and F. L. Heffron. 2008. Use of high-throughput mass spectrometry to elucidate host-pathogen interactions in Salmonella. Future Microbiol. 3:625-634. PMID: 19072180
Sacks, J. A. and M. J. Bevan. 2008. TRAIL-deficiency does not rescue impaired CD8+ T cell memory generated in the absence of CD4+ T cell help. J. Immunol. 180:4570-4576. PMID:18354179
Sakabe, S., Y. Sakoda, Y. Haraguchi, N. Isoda, K. Soda, H. Takakuwa, K. Saijo, A. Sawata, K. Kume, J. Hagiwara, K. Tuchiya, A. Lin, R. Sakamoto, T. Imamura, T. Sasaki, N. Kokumai, Y. Kawaoka, and H. Kida. 2008. A vaccine prepared from a non-pathogenic H7N7 virus isolated from natural reservoir conferred protective immunity against the challenge with lethal dose of highly pathogenic avian influenza virus in chickens. Vaccine. 26:2127-2134. PMID: 18346824
Sawai, T., Y. Itoh, H. Ozaki, N. Isoda, K. Okamoto, Y. Kashima, Y. Kawaoka, Y. Takeuchi, H. Kida, and K. Ogasawara. 2008. Induction of cytotoxic T-lymphocyte and antibody responses against highly pathogenic avian influenza virus infection in mice by inoculation of apathogenic H5N1 influenza virus particles inactivated with formalin. Immunology. 124:155-165. PMID: 18205793 PMCID: PMC2566620
Sheahan, T., B. Rockx, E. Donaldson, D. Corti, and R. Baric. 2008. Pathways of cross species transmission of synthetically reconstructed zoonotic SARS-CoV. J. Virol. 82:8721-8732. PMID: 18579604 PMCID: PMC2519660
Sheahan, T., B. Rockx, E. Donaldson, A. Sims, R. Pickles, and R. S. Baric. 2008. Mechanisms of zoonotic SARS-CoV host range expansion in human airway epithelium. J. Virol. 82:2274-2285. PMID: 18094188 PMCID: PMC2258931
Sparks, J. S., E. F. Donaldson, X. Lu, R. S. Baric, and M. R. Denison. 2008. A novel mutation in murine hepatitis virus nsp5, the viral 3C-like proteinase, causes temperature-sensitive defects in viral growth and protein processing. J. Virol. 82:5999-6008. PMID: 18385240 PMCID: PMC2395152
Sugaya, N., D. Tamura, M. Yamazaki, M. Ichikawa, C. Kawakami, Y. Kawaoka, and K. Mitamura. 2008. Comparison of the clinical effectiveness of oseltamivir and zanamivir against influenza virus infection in children. Clin. Infect. Dis. 47:339-345. PMID: 18582202
Suzuki, R., R. Fayzulin, I. Frolov, and P. W. Mason. 2008. Identification of mutated cyclization sequences that permit efficient replication of West Nile virus genomes: use in safer propagation of a novel vaccine candidate. J. Virol. 82:6942-6951. PMID: 18480453 PMCID: PMC2446964
Takhasi, K., M. Yoneyama, T. Nishihori, R. Hirai, H. Kumeta, R. Narita, F. Inagaki, M. Gale, Jr., and T. Fujita. 2008. Nonself RNA-sensing mechanism of RIG-I helicase and activation of antiviral immune responses. Mol. Cell. 29:1-13. PMID: 18242112
Teunis, P., C. Moe, P. Liu, S. Miller, L. Lindesmith, R. Baric, J. Le Pendu, and R. L. Calderon. 2008. Norwalk virus: How infectious is it. J. Med. Virol. 80:1468-1476. PMID: 18551613
Watanabe, T., S. Watanabe, J. H. Kim, M. Hatta, and Y. Kawaoka. 2008. Novel approach to the development of effective H5N1 influenza A virus vaccines: Use of M2 cytoplasmic tail mutants. J. Virol. 82:2486-2492. PMID: 18160446 PMCID: PMC2258945
Widman, D. G., T. Ishikawa, R. Fayzulin, N. Bourne, and P. W. Mason. 2008. Construction and characterization of a second-generation pseudoinfectious West Nile virus vaccine propagated using a new cultivation system. Vaccine. 26:2762-2771. PMID: 18423946
Widman, D. G., I. Frolov, and P. W. Mason. 2008. Third-generation flavivirus vaccines based on single-cycle, encapsidation-defective viruses. Adv. Virus Res. 72:77-126. PMID: 19081489
Williams M. A., E. V. Ravkov, and M. J. Bevan. 2008. Rapid culling of the CD4+ T cell response in the transition from effector to memory. Immunity. 28:533-545. PMID:18356084 PMCID: PMC2391296
Yamayoshi, S., T. Noda, H. Ebihara, H. Goto, Y. Morikawa, I. S. Lukashevich, G. Neumann, H. Feldmann, and Y. Kawaoka. 2008. Ebola virus matrix protein VP40 uses the COPII transport system for its intracellular transport. Cell Host Microbe. 3:168-177. PMID: 18329616 PMCID: PMC2330329
Zhu, Q., H. Yang, W. Chen, W. Cao, G. Zhong, P. Jiao, G. Deng, K. Yu, C. Yang, Z. Bu, Y. Kawaoka, and H. Chen. 2008. A naturally occurring deletion in its NS gene contributes to the attenuation of an H5N1 swine influenza virus in chickens. J. Virol. 82:220-228. PMID: 17942562 PMCID: PMC2224367
2007
Barklis, E., A. Still, M. Sabri, A. Hirsch, J. Nikolich-Zugich, J. Brien, T. Dhenub, I. Scholz, and A. Alfadhli. 2007. Sultam thiourea inhibition of West Nile virus. Antimicrob. Agents Chemother. 51:2642-2645. PMID: 17452483 PMCID: PMC1913232
Baskin, C. R., H. Bielefeldt-Ohmann, A. García-Sastre, T. M. Tumpey, H. N. Van, V. S. Carter, M. J. Thomas, S. Proll, A. Solórzano, R. Billharz, J. L. Fornek, S. Thomas, C. H. Chen, E. A. Clark, M. K. Kaja, and M. G. Katze. 2007. Functional genomic and serological analysis of the protective immune response resulting from vaccination of macaques with an NS1-truncated influenza virus. J. Virol. 81:11817-11827. PMID: 17715226 PMCID: PMC2168783
Bourne, N., F. Scholle, M. C. Silva, S. L. Rossi, N. Dewsbury, B. Judy, J. B. De Aguiar, M. A. Leon, D. M. Estes, R. Fayzulin, and P. W. Mason. 2007. Early production of type I interferon during West Nile virus infection: role for lymphoid tissues in IRF3-independent interferon production. J. Virol. 81:9100-9108. PMID:17567689 PMCID: PMC1951458
Brien, J. D., J. L. Uhrlaub, and J. Nikolich-Zugich. 2007. Protective capacity and epitope specificity of CD8+ T-cells responding to lethal West Nile virus infection. Eur. J. Immunol. 37:1855-1863. PMID: 17559175
Daffis, S., M. A. Samuel, B. C. Keller, M. Gale, Jr., and M. S. Diamond. 2007. Cell-specific IRF-3 responses protect against West Nile virus infection by IFN-dependent and independent mechanisms. PLoS Pathogens. 3:e106. PMID: 17676997 PMCID: PMC1933455
de Lang, A., T. Baas, T. Teal, L. M. Leijten, B. Rain, A. D. Osterhaus, B. L. Haagmans, and M. G. Katze. 2007. Functional genomics highlights differential induction of antiviral pathways in the lungs of SARS-CoV-infected macaques. PLoS Pathog. 3:e112. PMID: 17696609 PMCID: PMC1941749
Ebihara, H., S. Theriault, G. Neumann, J. B. Alimonti, J. B. Geisbert, L. E. Hensley, A. Groseth, S. M. Jones, T. W. Geisbert, Y. Kawaoka, and H. Feldmann. 2007. In vitro and in vivo characterization of recombinant Ebola viruses expressing enhanced green fluorescent protein. J. Infect. Dis. 196 Suppl 2:S313-322. PMID: 17940966
Feldmann, H., T. Geisbert, and Y. Kawaoka. 2007. Filoviruses: Recent advances and future challenges. J. Infect. Dis. 196 Suppl 2:S129-130. PMID: 17940939
Fornek, J. L., M. J. Korth, and M. G. Katze. 2007. Use of functional genomics to understand influenza-host interactions. Adv. Virus Res. 70:81-100. PMID: 17765704
Fredericksen, B., B. Keller, J. Fornek, M. G. Katze, and M. Gale, Jr. 2007. Establishment and maintenance of the innate antiviral response to West Nile virus involves both RIG-I and MDA5 signaling through IPS-1. J. Virol. 82:609-616. PMID: 17977974 PMCID: PMC2224571
Frieman, M., B. Yount, M. Heise, S. A. Kopecky-Bromberg, P. Palese, and R. S. Baric. 2007. Severe acute respiratory syndrome coronavirus ORF6 antagonizes STAT1 function by sequestering nuclear import factors on the rough endoplasmic reticulum/Golgi membrane. J. Virol. 81:9812-9924. PMID: 17507479 PMCID: PMC1933338
Garulli, B., M. Meola, M. G. Stillitano, Y. Kawaoka, and M. R. Castrucci. 2007. Efficient vagina-to-lower respiratory tract immune trafficking in a murine model of influenza A virus infection. Virology. 361:274-282. PMID: 17222437
Gilfoy, F. D. and P. W. Mason. 2007. West Nile virus-induced IFN production is mediated by the double-stranded RNA-dependent protein kinase, PKR. J. Virol. 81:11148-11158. PMID: 17686861 PMCID: PMC2045557
Girard, Y. A., B. S. Schneider, C. E. McGee, J. Wen, V. C. Han, V. Popov, P. W. Mason, and S. Higgs. 2007. Salivary gland morphology and virus transmission during long-term cytopathologic West Nile virus infection in culex mosquitoes. Am. J. Trop. Med. Hyg. 76:118-128. PMID: 17255239
Goodman, A. G., J. A. Smith, S. Balachandran, O. Perwitasari, S. C. Proll, M. J. Thomas, M. J. Korth, G. N. Barber, L. A. Schiff, and M. G. Katze. 2007. The cellular protein P58IPK regulates influenza virus mRNA translation and replication through a PKR-mediated mechanism. J. Virol. 81:2221-2230. PMID: 17166899 PMCID: PMC1865913
Gu, B., P. Mason, L. Wang, P. Norton, N. Bourne, R. Moriarty, A. Mehta, M. Despande, R. Shah, and T. Block. 2007. Antiviral profiles of novel iminocyclitol compounds against bovine viral diarrhea virus, West Nile virus, dengue virus and hepatitis B virus. Antivir. Chem. Chemother. 18:49-59. PMID: 17354651
Guo, C.T., N. Takahashi, H. Yagi, K. Kato, T. Takahashi, S. Q. Yi, Y. Chen, T. Ito, K. Otsuki, H. Kida, Y. Kawaoka, K. I. Hidari, D. Miyamoto, T. Suzuki, and Y. Suzuki. 2007. The quail and chicken intestine have sialyl-galactose sugar chains responsible for the binding of influenza A viruses to human type receptors. Glycobiology 17:713-724. PMID: 17389652
Hatakeyama, S., N. Sugaya, M. Ito, M. Yamazaki, M. Ichikawa, K. Kimura, M. Kiso, H. Shimizu, C. Kawakami, K. Koike, K. Mitamura, and Y. Kawaoka. 2007. Emergence of influenza B viruses with reduced sensitivity to neuraminidase inhibitors. JAMA 297:1435-1442. PMID: 17405969
Hatta, M., Y. Hatta, J. H. Kim, S. Watanabe, K. Shinya, T. Nguyen, P. S. Lien, W. M. Le, and Y. Kawaoka. 2007. Growth of H5N1 influenza A viruses in the upper respiratory tracts of mice. PLoS Pathog. 3:1374-1379. PMID: 17922570 PMCID: PMC2000968
Hatta, M., and Y. Kawaoka. 2007. Molecular determinants associated with high virulence of influenza A virus. Tanpakushitsu Kakusan Koso. 52:1237-1241. PMID: 17824246
Horimoto. T., S. Murakami, Y. Muramoto, S. Yamada, K. Fujii, M. Kiso, K. Iwatsuki-Horimoto, Y. Kino, and Y. Kawaoka. 2007. Enhanced growth of seed viruses for H5N1 influenza vaccines. Virology. 15:366(1):23-27. PMID: 17651774
Kamimura, D. and M. J. Bevan. 2007. Naïve CD8+ T cells differentiate into protective memory-like cells following IL-2/anti-IL-2 complex treatment in vivo. J. Exp. Med. 204:1803-1812. PMID: 17664293 PMCID: PMC2118678
Keller, B. C., C. L. Johnson, A. K. Erickson, and M. Gale, Jr. 2007. Innate immune evasion by hepatitis C virus and West Nile virus. Cytokine Growth Factor Rev. 5-6:535-544. PMID: 17702639
Kobasa, D., S. M. Jones, K. Shinya, J. C. Kash, J. Copps, H. Ebihara, Y. Hatta, J. H. Kim, P. Halfmann, M. Hatta, F. Feldmann, J. B. Alimonti, L. Fernando, Y. Li, M. G. Katze, H. Feldmann, and Y. Kawaoka. 2007. Aberrant innate immune response in lethal infection of macaques with the 1918 influenza virus. Nature 445:319-323. PMID: 17230189
Kurosaki, Y., A. Takada, H. Ebihara, A. Grolla, N. Kamo, H. Feldmann, Y. Kawaoka, and J. Yasuda. 2007. Rapid and simple detection of Ebola virus by reverse transcription-loop-mediated isothermal amplification. J. Virol. Methods. 141:78-83. PMID: 17194485
Loo, Y.-M., and M. Gale, Jr. 2007. Viral regulation and evasion of the host response. Curr. Top. Microbiol. Immunol. 316:295-313. PMID: 17969453
Malathi, K., B. Dong, M. Gale, Jr., and R. Silverman. 2007. Small self-RNA generated by RNase L amplifies antiviral innate immunity. Nature. 448:816-819. PMID: 17653195
Manes, N. P., J. K. Gustin, J. Rue, H. M. Mottaz, S. O. Purvine, A. D. Norbeck, M. E. Monroe, J. S. Zimmer, T. O. Metz, J. N. Adkins, R. D. Smith, and F. Heffron. 2007. Targeted protein degradation by Salmonella under phagosome-mimicking culture conditions investigated using comparative peptidomics. Mol. Cell Proteomics. 6:717-727. PMID: 17228056
Medigeshi, G. R., A. M. Lancaster, A. J. Hirsch, T. Briese, W. I. Lipkin, V. Defilippis, K. Fruh, P. W. Mason, J. Nikolich-Zugich, and J. A. Nelson. 2007. West Nile virus infection activates the unfolded protein response leading to CHOP induction and apoptosis. J. Virol. 81:10849-10860. PMID: 17686866 PMCID: PMC2045561
Morrison, T. E., R. J. Fraser, P. N. Smith, S. Mahalingam, and M. T. Heise. 2007. Complement contributes to inflammatory tissue destruction in a mouse model of Ross River virus-induced disease. J. Virol. 81:5132-5143. PMID: 17314163 PMCID: PMC1900244
Neumann, G., T. W. Geisbert, H. Ebihara, J. B. Geisbert, K. M. Daddario-DiCaprio, H. Feldmann, and Y. Kawaoka. 2007. Proteolytic processing of the Ebola virus glycoprotein is not critical for Ebola virus replication in nonhuman primates. J. Virol. 81:2995-2998. PMID: 17229700 PMCID: PMC1866002
Nochi, T., Y. Yuki, A. Matsumura, M. Mejima, K. Terahara, D. Y. Kim, S. Fukuyama, K. Iwatsuki-Horimoto, Y. Kawaoka, T. Kohda, S. Kozaki, O. Igarashi, and H. Kiyono. 2007. A novel M cell-specific carbohydrate-targeted mucosal vaccine effectively induces antigen-specific immune responses. J. Exp. Med. 204:2789-2796. PMID: 17984304 PMCID: PMC2118513
Noda, T., P. Halfmann, H. Sagara, and Y. Kawaoka. 2007. Regions in Ebola virus VP24 that are important for nucleocapsid formation. J. Infect. Dis. 196 Suppl 2:S247-250. PMID: 17940956
Noda, T., S. Watanabe, H. Sagara, and Y. Kawaoka. 2007. Mapping of the VP40-binding regions of the nucleoprotein of Ebola virus. J. Virol. 81:3554-3562. PMID: 17229682 PMCID: PMC1866061
Ozawa, M., K. Fujii, Y. Muramoto, S. Yamada, S. Yamayoshi, A. Takada, H. Goto, T. Horimoto, and Y. Kawaoka. 2007. Contributions of two nuclear localization signals of influenza A virus nucleoprotein to viral replication. J. Virol. 81:30-41. PMID: 17050598 PMCID: PMC1797272
Ozawa, M., H. Goto, T. Horimoto, and Y. Kawaoka. 2007. An adenovirus vector-mediated reverse genetics system for influenza A virus generation. J. Virol. 81:9556-9559. PMID: 17596315 PMCID: PMC1951417
Rigoni, M., K. Shinya, A. Toffan, A. Milani, F. Bettini, Y. Kawaoka, G. Cattoli, and I. Capua. 2007. Pneumo- and neurotropism of avian origin Italian highly pathogenic avian influenza H7N1 isolates in experimentally infected mice. Virology. 364:28-35. PMID: 17408714
Roberts, A., D. Deming, C. D. Paddock, A. Cheng, B. Yount, L. Vogel, B. D. Herman, T. Sheahan, M. Heise, G. L. Genrich, S. R. Zaki, R. Baric, and K. Subbarao. 2007. A mouse-adapted SARS-coronavirus causes disease and mortality in BALB/c mice. PLOS Pathogens. 3:23-37. PMID: 17222058 PMCID: PMC1769406
Rockx, B., T. Sheahan, E. Donaldson, J. Harkema, A. Sims, M. Heise, R. Pickles, M. Cameron, D. Kelvin, and R. Baric. 2007. Synthetic reconstruction of zoonotic and early human SARS-CoV isolates that produce fatal disease in aged mice. J. Virol. 81:7410-23. PMID: 17507479 PMCID: PMC1933338
Rossi, S. L., R. Fayzulin, N. Dewsbury, N. Bourne, and P. W. Mason. 2007. Mutations in West Nile virus nonstructural proteins that facilitate replicon persistence in vitro attenuate virus replication in vitro and in vivo. Virology. 384:184-195. PMID: 17382364
Saito, T., and M. Gale, Jr. 2007. Principles of intracellular viral recognition. Curr. Opin. Immunol. 19:17-23. PMID: 17118636
Saito, T., R. Hirai, Y.-M. Loo, D. Owen, C. L. Johnson, S. C. Sinha, S. Akira, T. Fujita, and M. Gale. Jr. 2007. Regulation of innate antiviral defenses through a shared repressor domain in RIG-I and LGP2. Proc. Natl. Acad. Sci. U.S.A. 104:582-587. PMID: 17190814 PMCID: PMC1766428
Sawada, T., T. Hashimoto, H. Nakano, T. Suzuki, Y. Suzuki, Y. Kawaoka, H. Ishida, and M. Kiso. 2007. Influenza viral hemagglutinin complicated shape is advantageous to its binding affinity for sialosaccharide receptor. Biochem. Biophys. Res. Commun. 355:6-9. PMID: 17292854
Shimojima, M., Y. Ikeda, and Y. Kawaoka. 2007. The mechanism of Axl-mediated Ebola virus infection. J. Infect. Dis. 196:S259-263. PMID: 17940958
Shinya, K., S. Watanabe, T. Ito, N. Kasai, and Y. Kawaoka. 2007. Adaptation of an H7N7 equine influenza A virus in mice. J. Gen. Virol. 88:547-553. PMID: 17251573
Shustov, A. V., P. W. Mason, and I. Frolov. 2007. Production of pseudoinfectious yellow fever virus with two-component genome. J. Virol. 81:11737-11748. PMID: 17715227 PMCID: PMC2168813
Silva, M. C., A. Guerrero-Plat, F. D. Gilfoy, R. P. Garofalo, and P. W. Mason. 2007. Differential activation of human monocyte-derived and plasmacytoid dendritic cells by West Nile virus generated in different host cells. J. Virol. 81:13640-13648. PMID: 17913823 PMCID: PMC2168853
Sugaya, N., K. Mitamura, M. Yamazaki, D. Tamura, M. Ichikawa, K. Kimura, C. Kawakami, M. Kiso, M. Ito, S. Hatakeyama, and Y. Kawaoka. 2007. Lower clinical effectiveness of oseltamivir against influenza B contrasted with influenza A infection in children. Clin. Infect. Dis. 44:197-202. PMID: 17173216
Suzuki, R., L. de Borba, C. N. Duarte Dos Santos, and P. W. Mason 2007. Construction of an infectious cDNA clone for a Brazilian prototype strain of dengue virus type 1: Characterization of a temperature-sensitive mutation in NS1. Virology. 363:374-383. PMID: 17382364 PMCID: PMC2396755
Takada, A., H. Ebihara, H. Feldmann, T. W. Geisbert, and Y. Kawaoka. 2007. Epitopes required for antibody-dependent enhancement of Ebola virus infection. J. Infect. Dis. 196 Suppl 2:S347-356. PMID: 17940966
Takada, A., H. Ebihara, S. Jones, H. Feldmann, and Y. Kawaoka. 2007. Protective efficacy of neutralizing antibodies against Ebola virus infection. Vaccine. 25:993-999. PMID: 17055127
Urata, S., T. Noda, Y. Kawaoka, S. Morikawa, H. Yokosawa, J. Yasuda. 2007. Interaction of Tsg101 with Marburg virus VP40 depends on the PPPY motif, but not the PT/SAP motif as in the case of Ebola virus, and Tsg101 plays a critical role in the budding of Marburg virus-like particles induced by VP40, NP, and GP. J. Virol. 81:4895-4899. PMID: 17301151 PMCID: PMC1900181
Vasilakis, N., E. J. Shell, E. B. Fokam, P. W. Mason, K. A. Hanley, D. M. Estes, and S. C. Weaver. 2007. Potential of ancestral sylvatic dengue-2 viruses to re-emerge. Virology. 358:402-412. PMID: 17014880
Watanabe, S., T. Noda, P. Halfmann, L. Jasenosky, and Y. Kawaoka. 2007. Ebola virus (EBOV) VP24 inhibits transcription and replication of the EBOV genome. J. Infect. Dis. 196:S284-290. PMID: 17940962
Yamayoshi S, Kawaoka Y. 2007. Mapping of a region of Ebola virus VP40 that is important in the production of virus-like particles. J. Infect. Dis. 196:S291-295. PMID: 17940963
2006
Adkins, J. N., h. M. Mottaz, A. D. Norbeck, J. K. Gustin, J. Rue, T. R. Clauss, S. O. Purvine, K. D. Rodland, F. Heffron, and R. D. Smith. 2006. Analysis of the Salmonella typhimurium proteome through environmental response toward infectious conditions. Mol. Cell. Proteomics. 5:1450-1461. PMID: 16684765
Baas, T., C. R. Baskin, D. L. Diamond, A. Garcia-Sastre, H. Bielefeldt-Ohmann, T. M. Tumpey, M. J. Thomas, V. S. Carter, T. H. Teal, N. Van Hoeven, S. C. Proll, J. M. Jacobs, Z. R. Caldwell, M. A. Gritsenko, R. R. Hukkanen, D. G. Camp, R. D. Smith, and M. G. Katze. 2006. Integrated molecular signature of disease: analysis of influenza virus-infected macaques through functional genomics and proteomics. J. Virol. 80:10813-10828. PMID: 16928763 PMCID: PMC1641753
Baas, T., J. Taubenberger, P. Y. Chong, P. Chui, and M. G. Katze. 2006. SARS-CoV virus-host interactions and comparative etiologies of acute respiratory distress syndrome as determined by transcriptional and cytokine profiling of formalin-fixed paraffin-embedded tissues. J. Interferon Cytokine Res. 26:309-317. PMID: 16689659
Bär S, A. Takada, Y. Kawaoka, and M. Alizon. 2006. Detection of cell-cell fusion mediated by the Ebola virus glycoproteins. Running title: Ebola virus GP-mediated fusion. J. Virol. 80:2815-2822. PMID: 16501090 PMCID: PMC1395460
Cardenas, W, Y.-M. Loo, M. Gale, Jr., A. L. Hartman, C. R. Kimberlin, L.-M. Sobrido, E. O. Saphire, and C. Basier. 2006. The Ebola virus VP35 protein binds double stranded RNA and inhibits alpha/beta interferon production induced by RIG-I signaling. J. Virol. 80:5168-5178. PMID: 16698997 PMCID: PMC1472134
Chen, H., Y. Li, Z. Li, J. Shi, K. Shinya, G. Deng, Q. Qi, G. Tian, S. Fan, H. Zhao, Y. Sun, and Y. Kawaoka. 2006. Properties and dissemination of H5N1 viruses isolated during an influenza outbreak in migratory waterfowl in western China. J. Virol. 80:5976-5983. PMID: 16731936 PMCID: PMC1472608
Co, D.O., L. H. Hogan, J. Karman, E. Heninger, S. Vang, K. Wells, Y. Kawaoka, and M. Sandor. 2006. Interactions between T cells responding to concurrent mycobacterial and influenza infections. J. Immunol. 177:8456-8465. PMID: 17142743
Deming, D., T. Sheahan, M. Heise, B. Yount, N. Davis, A. Sims, M. Suthar, J. Harkema, A. Whitmore, R. Pickles, A. West, E. Donaldson, K. Curtis, R. Johnston, and R. Baric. 2006. Vaccine efficacy in senescent mice challenged with recombinant SARS-CoV bearing epidemic and zoonotic spike variants. PLoS Med. 3:e525. PMID: 17194199 PMCID: PMC1716185
Ebihara, H., A. Takada, D. Kobasa, S. Jones, G. Neumann, S. Theriault, M. Bray, H. Feldmann, and Y. Kawaoka. 2006. Molecular determinants of Ebola virus virulence in mice. PLoS Pathog. 2(7):e73. PMID: 16848640 PMCID: PMC1513261
Fayzulin, R., F. Scholle, O. Petrakova, I. Frolov, and P. W. Mason. 2006. Evaluation of replicative capacity and genetic stability of West Nile virus replicons using highly efficient packaging cell lines. Virology. 351:196-209. PMID: 16647099
Filone, C. M., M. Heise, R. W. Doms, and A. Bertolotti-Ciarlet. 2006. Development and characterization of a Rift Valley fever virus cell-cell fusion assay using alphavirus replicon vectors. Virology. 356:155-164. PMID: 16945399
Fredericksen, B., and M. Gale, Jr. 2006. West Nile virus evades activation of interferon regulatory 3 through RIG-I-dependent and independent pathways without antagonizing host defense signaling. J. Virol. 80:2913-2923. PMID: 16501100 PMCID: PMC1395472
Gu, B., S. Ouzunov, L. Wang, P. Mason, N. Bourne, A. Cuconati, and T. M. Block. 2006. Discovery of small molecule inhibitors of West Nile virus using a high-throughput sub-genomic replicon screen. Antiviral. Res. 70:39-50. PMID: 16724398
Hatakeyama, S., and Y. Kawaoka. 2006. The molecular basis of resistance to anti-influenza drugs. Nippon Rinsho. 64:1845-1852. PMID: 17037359
Hixson, K. K., J. N. Adkins, S. E. Baker, R. J. Moore, B. A. Chromy, R. D. Smith, S. L. McCutchen-Maloney, and M. S. Lipton. 2006. Biomarker candidate identification in Yersinia pestis using organism-wide semiquantitative proteomics. J. Proteome Res. 5:3008-3017. PMID: 17081052
Horimoto, T., and Y. Kawaoka. 2006. Strategies for developing vaccines against H5N1 influenza A viruses. Trends Mol. Med. 12:506-514. PMID: 17011235
Horimoto, T., A. Takada, K. Fujii, H. Goto, M. Hatta, S. Watanabe, K. Iwatsuki-Horimoto, M. Ito, Y. Tagawa-Sakai, S. Yamada, H. Ito, T. Ito, M. Imai, S. Itamura, T. Odagiri, M. Tashiro, W. Lim, Y. Guan, M. Peiris, and Y. Kawaoka. 2006. The development and characterization of H5 influenza virus vaccines derived from a 2003 human isolate. Vaccine. 24:3669-3676. PMID: 16378663
Iwatsuki-Horimoto, K., T. Horimoto, T. Noda, M. Kiso, J. Maeda, S. Watanabe, Y. Muramoto, K. Fujii, and Y. Kawaoka. 2006. The cytoplasmic tail of the influenza A virus M2 protein plays a role in viral assembly. J. Virol. 80:5233-5240. PMID: 16699003 PMCID: PMC1472145
Kash, J. C., A. G. Goodman, M. J. Korth, and M. G. Katze. 2006. Hijacking of the host-cell response and translational control during influenza virus infection. Virus Res. 119:111-120. PMID: 16630668
Kash, J. C., E. Mühlberger, V. Carter, O. Grosch, O. Perwitasari, S. C. Proll, M. J. Thomas, F. Weber, H.-D. Klenk, and M. G. Katze. 2006. Global suppression of the host antiviral response by Ebola- and Marburgviruses: increased antagonism of the type 1 interferon response is associated with enhanced virulence. J. Virol. 80:3009-3020. PMID: 16501110 PMCID: PMC1395418
Kash, J. C., T. M. Tumpey, S. C. Proll, V. Carter, O. Perwitasari, M. J. Thomas, C. F. Basler, P. Palese, J. K. Taubenberger, A. Garcia-Sastre, D. E. Swayne, and M. G. Katze.2006. Genomic analysis of increased host immune and cell death responses induced by 1918 influenza virus. Nature 443:578-581. PMID: 17006449 PMCID: PMC2615558
Keller, B. C., B. L. Fredericksen, M. A. Samuel, R. E. Mock, P. W. Mason, M. S. Diamond, and M. Gale, Jr. 2006. Resistance to alpha/beta interferon is a determinant of West Nile virus replication fitness and virulence. J. Virol. 80:9424-9434. PMID: 6973548 PMCID: PMC1951458
Korth, M. J., J. C. Kash, C. R. Baskin, and M. G. Katze. 2006. Insights into influenza virus-host interactions through global gene expression profiling: cell culture systems to animal models, p. 341-360. In: Influenza virology: current topics. Y. Kawaoka (ed.), Horizon Scientific Press, Wymondham, U.K.
Langland, J. O., J. C. Kash, V. Carter, M. J. Thomas, M. G. Katze, and B. L. Jacobs. 2006. Suppression of proinflammatory signal transduction and gene expression by the dual nucleic acid binding domains of the vaccinia virus E3L proteins. J. Virol. 80:10083-10095. PMID: 17005686 PMCID: PMC1617298
Mason, P. W., A. V. Shustov, and I. Frolov. 2006. Production and characterization of vaccines based on flaviviruses defective in replication. Virology 351:432-443. PMID: 16712897 PMCID: PMC2430078
Mibayashi, M., L. Marinez-Sobrido, Y.-M. Loo, W. B. Cardenas, C. Basler, M. Gale, Jr., and A. Garcia-Sastre. 2006. Inhibition of retinoic acid-inducible gene-I-mediated induction of interferon-b by the NS1 protein of influenza virus. J. Virol. 81:514-524. PMID: 17079289 PMCID: PMC1797471
Morrison, T. E., A. C. Whitmore, R. S. Shabman, B. A. Lidbury, S. Mahalingam, and M. T. Heise. 2006. Characterization of Ross River virus tropism and virus-induced inflammation in a mouse model of viral arthritis and myositis. J. Virol. 80:737-749. PMID: 16378976 PMCID: PMC1346871
Muramoto, Y., T. Q. Le, L. S. Phuong, T. Nguyen, T. H. Nguyen, Y. Sakai-Tagawa, T. Horimoto, H. Kida, and Y. Kawaoka. 2006. Pathogenicity of H5N1 influenza A viruses isolated in Vietnam between late 2003 and 2005. J. Vet. Med. Sci. 68:735-737. PMID: 16891788
Muramoto, Y., T. Noda, and Y. Kawaoka. 2006. Selective packaging mechanism for influenza A virus. Tanpakushitsu Kakusan Koso. 51:1596-1601. PMID: 17005688 PMCID: PMC1617303
Muramoto, Y., H. Ozaki, A. Takada, C. H. Park, Y. Sunden, T. Umemura, Y. Kawaoka, H. Matsuda, and H. Kida. 2006. Highly pathogenic H5N1 influenza virus causes coagulopathy in chickens. Microbiol. Immunol. 50:73-81. PMID: 16378663
Muramoto, Y., A. Takada, K. Fujii, T. Noda, K. Iwatsuki-Horimoto, S. Watanabe, T. Horimoto, H. Kida, and Y. Kawaoka. 2006. Hierarchy among vRNA segments in their role in vRNA incorporation into influenza A virions. J. Virol. 80:2318-2325. PMID: 16474138 PMCID: PMC1395381
Neumann, G., and Y. Kawaoka Y. 2006. Host range restriction and pathogenicity in the context of influenza pandemic. Emerg. Infect. Dis. 12:881-886. PMID: 16707041
Noda, T., H. Ebihara, Y. Muramoto, K. Fujii, A. Takada, H. Sagara, J. H. Kim, H. Kida, H. Feldmann, and Y. Kawaoka. 2006. Assembly and budding of Ebolavirus. PLoS Pathog. 2:e99. PMID: 17009868 PMCID: PMC1579243
Noda, T., and Y. Kawaoka. 2006. Classification and virion structure of influenza virus. Nippon Rinsho. 64:1766-1769. PMID: 17037359
Noda, T., H. Sagara, A. Yen, A. Takada, A. Kida, R. H. Cheng, and Y. Kawaoka. 2006. Architecture of ribonucleoprotein complexes in influenza A virus particles. Nature. 439:490-492. PMID: 16437116
Prlic, M., G. Hernandez-Hoyos, and M. J. Bevan. 2006. Duration of the initial TCR stimulus controls the magnitude but not functionality of the CD8+ T cell response. J. Exp. Med. 203:2135-2143. PMID: 16923970 PMCID: PMC2118397
Samuel, M., R. Whitby, B. Keller, A. Marri, W. Barchet, B. R. G. Williams, R. Siliverman, M. Gale, Jr., and M. S. Diamond. 2006. PKR and RNase L contribute to protection against lethal West Nile virus infection by controlling early viral spread in the periphery and replication in neurons. J. Virol. 80:7009-7019. PMID: 16809306 PMCID: PMC1489062
Schneider, B. S., L. Soong, Y. A. Girard, G. Campbell, P. Mason, and S. Higgs. 2006. Potentiation of West Nile encephalitis by mosquito feeding. Viral Immunol. 19:74-82. PMID: 16553552
Shabman R.S., T. E. Morrison, C. Moore, L. White, M. S. Suthar, L. Hueston, N. Rulli, B. Lidbury, J. P. Ting, S. Mahalingam, and M. T. Heise. 2006. Differential induction of Type I interferon responses in myeloid dendritic cells by mosquito and mammalian cell-derived alphaviruses. J. Virol. 81:237-247. PMID: 17079324 PMCID: PMC1797231
Shi, L., J. N. Adkins, J. R. Coleman, A. A. Schepmoes, A. Dohnkova, H. M. Mottaz, A. D. Norbeck, S. O. Purvine, N. P. Manes, H. S. Smallwood, H. Wang, J. Forbes, P. Gros, S. Uzzau, K. D. Rodland, F. Heffron, R. D. Smith, and T. C. Squier. 2006. Proteomic analysis of Salmonella enterica serovar typhimurium isolated from RAW 264.7 macrophages: identification of a novel protein that contributes to the replication of serovar typhimurium inside macrophages J. Biol. Chem. 281:29131-29140. PMID: 16893888
Shimojima, M., A. Takada, H. Ebihara, G. Neumann, K. Fujioka, T. Irimura, S. Jones, H. Feldmann, and Y. Kawaoka. 2006. Tyro3 family-mediated cell entry of Ebola and Marburg viruses. J. Virol. 80:10109-10116. PMID: 17005688 PMCID: PMC1617303
Shinya, K., M. Ebina, S. Yamada, M. Ono, N. Kasai, and Y. Kawaoka. 2006. Avian Flu: Influenza virus receptors in the human airway. Nature. 440:435-436. PMID: 16554799
Sun, J. C., S. M. Lehar, and M. J. Bevan. 2006. Augmented IL-7 signaling during viral infection drives greater expansion of effector T cells but does not enhance memory. J. Immunol. 177:4458-4463. PMID: 16982881
Urata, S., T. Noda, Y. Kawaoka, H. Yokosawa, and J. Yasuda. 2006. Cellular factors required for Lassa virus budding. J. Virol. 80:4191-4195. PMID: 16571837 PMCID: PMC1440458
Watanabe, S., T. Noda, and Y. Kawaoka. 2006. Functional mapping of the nucleoprotein of Ebola virus. J. Virol. 80:3743-3751. PMID: 16571791 PMCID: PMC1440433
Williams, M. A., A. J. Tyznik, and M. J. Bevan. 2006. Interleukin-2 signals during priming are required for secondary expansion of CD8+ memory T cells. Nature. 441:890-893. PMID: 16778891
Williams, M. A., B. J. Holmes, J. C. Sun, and M. J. Bevan. 2006. Developing and maintaining protective CD8+ memory T cells. Immunol. Rev. 211:146-153. PMID: 16824124
Yamada, S., Y. Suzuki, T. Suzuki, M. Q. Le, C. A. Nidom, Y. Sakai-Tagawa, Y. Muramoto, M. Ito, M. Kiso, T. Horimoto, K. Shinya, T. Sawada, M. Kiso, T. Usui, T. Murata, Y. Lin, A. Hay, L. F. Haire, D. J. Stevens, R. J. Russell, S. J. Gamblin, J. J. Skehel, and Y. Kawaoka. 2006. Haemagglutinin mutations responsible for the binding of H5N1 influenza A viruses to human-type receptors. Nature. 444:378-382. PMID: 17055127
