Gene Microarray Shared Resource Publication Information

Home

About GMSR

Key Personnel

GMSR Training & Workshop Information

Customer Publications and GMSR Acknowledgment Information

Job Openings

GMSR Supported Publications

The following publications are from investigators who used GMSR core facilities. If you have published in conjunction with using GMSR resources and would like your publication to appear on this list please send your citation information to gmsr@ohsu.edu.

Belusko PB, Nakajima T, Azuma M, Shearer TR
Expression changes in mRNAs and mitochondrial damage in lens epithelial cells with selenite.
Biochim Biophys Acta. 2003 Oct 13;1623(2-3):135-42.
PubMed abstract for this article

Fang Y, Choi D, Searles RP, Mathers WD
A time course microarray study of gene expression in the mouse lacrimal gland after acute corneal trauma.
Invest Ophthalmol Vis Sci 2005 Feb; 46(2):461-9.
PubMed abstract for this article

Fass DM, Butler JE, Goodman RH
Deacetylase activity is required for cAMP activation of a subset of CREB target genes.
J Biol Chem. 2003 Oct 31; 278(44):43014-9. Epub 2003 Aug.
PubMed abstract for this article

Hitzemann R, Malmanger B, Reed C, Lawler M, Hitzemann B, Coulombe S, Buck K, Rademacher B, Walter N, Polyakov Y, Sikela J, Gensler B, Burgers S, Williams RW, Manly K, Flint J, Talbot C.
A strategy for the integration of QTL, gene expression, and sequence analyses.
Mamm Genome. 2003 Nov;14(11):733-47.
PubMed abstract for this article

Hitzemann R, Reed C, Malmanger B, Lawler M, Hitzemann B, Cunningham B, McWeeney S, Belknap J, Harrington C, Buck K, Phillips T, Crabbe J.
On the integration of alcohol-related quantitative trait loci and gene expression analyses.
Alcohol Clin Exp Res. 2004 Oct;28(10):1437-48.
PubMed abstract for this article

Impey S, McCorkle SR, Cha-Molstad H, Dwyer JM, Yochum GS, Boss JM, McWeeney S, Dunn JJ, Mandel G, Goodman RH.
Defining the CREB regulon: a genome-wide analysis of transcription factor regulatory regions.
Cell. 2004 Dec 29;119(7):1041-54
PubMed abstract for this article

Kuninger D, Kuzmickas R, Peng B, Pintar JE, Rotwein P.
Gene discovery by microarray: identification of novel genes induced during growth factor-mediated muscle cell survival and differentiation.
Genomics. 2004 Nov;84(5):876-89.
PubMed abstract for this article

Moses AV, Jarvis MA, Raggo C, Bell YC, Ruhl R, Luukkonen BG, Griffith DJ, Wait CL, Druker BJ, Heinrich MC, Nelson JA, Fruh K.
A functional genomics approach to Kaposi's sarcoma.
Ann N Y Acad Sci. 2002 Dec;975:180-91.
PubMed abstract for this article

Moses AV, Jarvis MA, Raggo C, Bell YC, Ruhl R, Luukkonen BG, Griffith DJ, Wait CL, Druker BJ, Heinrich MC, Nelson JA, Fruh K.
Kaposi's sarcoma-associated herpesvirus-induced upregulation of the c-kit proto-oncogene, as identified by gene expression profiling, is essential for the transformation of endothelial cells.
J Virol. 2002 Aug;76(16):8383-99.
PubMed abstract for this article

Reddy PH, McWeeney S, Park BS, Manczak M, Gutala RV, Partovi D, Jung Y, Yau V, Searles R, Mori M, Quinn J.
Gene expression profiles of transcripts in amyloid precursor protein transgenic mice: up-regulation of mitochondrial metabolism and apoptotic genes is an early cellular change in Alzheimer's disease.
Hum Mol Genet. 2004 Jun 15;13(12):1225-40.
PubMed abstract for this article

Stenzel-Poore MP, Stevens SL, Xiong Z, Lessov NS, Harrington CA, Mori M, Meller R, Rosenzweig HL, Tobar E, Shaw TE, Chu X, Simon RP.
Effect of ischaemic preconditioning on genomic response to cerebral ischaemia: similarity to neuroprotective strategies in hibernation and hypoxia-tolerant states.
Lancet. 2003 Sep 27;362(9389):1028-37.
PubMed abstract for this article

Tian W, Cohen DM.
Urea stress more akin to epidermal growth factor exposure than to hypertonic stress in renal medullary cells.
Am J Physiol Renal Physiol. 2002 Sep;283(3):F388-98.
PubMed abstract for this article

Wang Z, Liu Y, Mori M, Kulesz-Martin M
Gene expression profiling of initiated epidermal cells with benign or malignant tumor fates.
Carcinogenesis. 2002 Apr;23(4):635-43.
PubMed abstract for this article
More information: http://www.ohsu.edu/som-Dermatology/research/initiation_profile.html

Weinberg AD, Evans DE, Thalhofer C, Shi T, Prell RA.
The generation of T cell memory: a review describing the molecular and cellular events following OX40 (CD134) engagement.
J Leukoc Biol. 2004 Jun;75(6):962-72. Epub 2004 Mar 02.
PubMed abstract for this article

Xu J, Stouffer RL, Searles RP, Hennebold JD
Discovery of LH-regulated genes in the primate corpus luteum.
Mol Hum Reprod. 2005 Feb 21; [Epub ahead of print]
PubMed abstract for this article

We would appreciate the inclusion of the following acknowledgment in publications and presentations of work done in the GMSR core facilities:

Microarray assays (and/or data analysis) were performed in the (Affymetrix Microarray Core/Spotted Microarray Core/Bioinformatics and Biostatistics Core) of the OHSU Gene Microarray Shared Resource.

GMSR Links: